SNP Profiles of PNG 197 View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
1._PNG_197	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
2._PNG_197	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
3._GC-01-090-5-07	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
4._GC-01-090-5-07	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
5._GC-01-090-5-07	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	AA	AA	CT	AA
6._PNG_197	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	_	AA	CT	AA
7._PNG_197	CC	AG	CG	CT	TT	AA	CT	GT	_	CT	AA	AA	CT	AA
8._GC-01-090-5-07	CC	AG	CG	CT	TT	AA	CT	GT	CC	CT	_	AA	CT	AA
9._GC-01-090-5-07	CC	AG	CG	CT	TT	AA	CT	GT	_	CT	AA	AA	CT	AA
10._RUQ_1291	_	AG	CG	CT	_	_	_	GT	_	_	_	_	CT	AA
11._RUQ_1291	CC	AG	CG	CT	TT	AC	CT	GT	CC	CT	AA	AA	CT	AA
12._RUQ_1291	_	_	CG	_	_	_	_	GT	_	CT	_	AA	_	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
1._PNG_197	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
2._PNG_197	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
3._GC-01-090-5-07	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
4._GC-01-090-5-07	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
5._GC-01-090-5-07	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
6._PNG_197	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
7._PNG_197	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
8._GC-01-090-5-07	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
9._GC-01-090-5-07	CC	AA	GG	TT	CC	CC	GT	AA	CT	CC	CG	TT	CT	CC
10._RUQ_1291	_	_	_	_	CC	CC	GT	_	CT	CC	GG	TT	CT	CC
11._RUQ_1291	CC	AA	GG	TT	CC	CC	GT	AG	CT	CC	CG	TT	CT	CC
12._RUQ_1291	_	_	_	_	_	CC	GT	AG	_	CC	CG	_	_	AC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
1._PNG_197	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
2._PNG_197	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
3._GC-01-090-5-07	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
4._GC-01-090-5-07	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
5._GC-01-090-5-07	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
6._PNG_197	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
7._PNG_197	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
8._GC-01-090-5-07	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
9._GC-01-090-5-07	AA	GG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
10._RUQ_1291	AA	_	AT	CT	AG	GG	AC	CC	GT	AC	_	_	X_X	X_X
11._RUQ_1291	AA	AG	AT	CT	AG	GG	AC	CC	GT	AC	TT	GG	X_X	X_X
12._RUQ_1291	_	_	_	_	AG	_	_	_	_	AC	_	_	X_X	X_X

Input profile: PNG_197

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1507 2

Dapeng Zhang, 2016

1._PNG_197

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1507 4

Dapeng Zhang, 2016

2._PNG_197

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1507 5

Dapeng Zhang, 2016

3._PNG_197 GC-01-090-5-07

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

4._PNG_197 GC-01-090-5-07

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

5._PNG_197 GC-01-090-5-07

identical
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

6._PNG_197

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1507 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

7._PNG_197

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1507 3

Dapeng Zhang, 2016

8._PNG_197 GC-01-090-5-07

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

9._PNG_197 GC-01-090-5-07

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

10._PNG_197 RUQ_1291

97.9 %
24 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

11._PNG_197 RUQ_1291

96.3 %
40 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

12._PNG_197 RUQ_1291

92.3 %
13 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25